Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10908
Gene Symbol: PNPLA6
PNPLA6
0.120 GeneticVariation disease BEFREE Mutations in patatin-like phospholipase domain-containing protein 6 (PNPLA6) have been linked with a number of inherited diseases with clinical symptoms that include spastic paraplegia, ataxia, and chorioretinal dystrophy. 31780887 2019
Entrez Id: 57498
Gene Symbol: KIDINS220
KIDINS220
0.110 GeneticVariation disease BEFREE Differing substantially from previous reports for KIDINS220 variants, our study family exhibited autosomal dominant inheritance, and only presented with spastic paraplegia, with no signs of intellectual disability, nystagmus, or obesity. 31630374 2019
Entrez Id: 4099
Gene Symbol: MAG
MAG
0.110 GeneticVariation disease BEFREE Here, we report the first patient with two compound heterozygous novel MAG mutations (p.A151V and p.S373R) and early developmental delay with a progressive complex phenotype characterized by spastic paraplegia, peripheral sensorimotor neuropathy, intellectual disability, and sensorial dysfunctions with severe optic atrophy and hearing involvement. 31402626 2019
Entrez Id: 5832
Gene Symbol: ALDH18A1
ALDH18A1
0.110 Biomarker disease BEFREE In 2015-2016, we and others reported ALDH18A1 mutations causing dominant (SPG9A) or recessive (SPG9B) spastic paraplegia. 31402623 2019
Entrez Id: 5354
Gene Symbol: PLP1
PLP1
0.140 GeneticVariation disease BEFREE Elucidation of the pathogenic mechanism and potential treatment strategy for a female patient with spastic paraplegia derived from a single-nucleotide deletion in PLP1. 31004103 2019
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.140 GeneticVariation disease BEFREE Mutations in ATL1 and ATL3 cause spastic paraplegia and hereditary sensory neuropathy. 30666337 2019
Entrez Id: 25923
Gene Symbol: ATL3
ATL3
0.010 GeneticVariation disease BEFREE Mutations in ATL1 and ATL3 cause spastic paraplegia and hereditary sensory neuropathy. 30666337 2019
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.180 Biomarker disease BEFREE Spastic paraplegia gene 11(SPG11)-linked hereditary spastic paraplegia is a complex monogenic neurodegenerative disease that in addition to spastic paraplegia is characterized by childhood onset cognitive impairment, thin corpus callosum and enlarged ventricles. 30476097 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.200 GeneticVariation disease BEFREE Spastic paraplegia due to SPAST mutations is modified by the underlying mutation and sex. 30476002 2018
Entrez Id: 10342
Gene Symbol: TFG
TFG
0.110 GeneticVariation disease BEFREE Previously, three homozygous variants of the TFG gene were reported in five families with SPG57, in which early onset spastic paraplegia, optic atrophy, and peripheral neuropathy were variably identified. 30467354 2019
Entrez Id: 10717
Gene Symbol: AP4B1
AP4B1
0.120 GeneticVariation disease BEFREE The cohort consists of three families with spastic paraplegia type 47 (AP4B1) with a common mutation in two families, a family with spastic paraplegia type 50 (AP4M1), and two male siblings with X-linked spastic paraplegia 2 (PLP1). 30337681 2019
Entrez Id: 9179
Gene Symbol: AP4M1
AP4M1
0.110 GeneticVariation disease BEFREE The cohort consists of three families with spastic paraplegia type 47 (AP4B1) with a common mutation in two families, a family with spastic paraplegia type 50 (AP4M1), and two male siblings with X-linked spastic paraplegia 2 (PLP1). 30337681 2019
Entrez Id: 80821
Gene Symbol: DDHD1
DDHD1
0.140 Biomarker disease BEFREE The Spastic Paraplegia-Associated Phospholipase DDHD1 Is a Primary Brain Phosphatidylinositol Lipase. 30221923 2018
Entrez Id: 271
Gene Symbol: AMPD2
AMPD2
0.120 GeneticVariation disease BEFREE 1.NAME OF DISEASE (SYNONYMS): Pontocerebellar hypoplasia type 9 (PCH9) and spastic paraplegia-63 (SPG63).2. 30089829 2019
Entrez Id: 80821
Gene Symbol: DDHD1
DDHD1
0.140 GeneticVariation disease BEFREE Reactive oxygen species production in DDHD2 knockout cells was reversed by the expression of wild-type DDHD2, but not by an active-site DDHD2 mutant, DDHD2 mutants related to hereditary spastic paraplegia, or DDHD1, another member of the intracellular phospholipase A<sub>1</sub> family whose mutation also causes spastic paraplegia (SPG28). 30038238 2018
Entrez Id: 23259
Gene Symbol: DDHD2
DDHD2
0.110 GeneticVariation disease BEFREE Loss of DDHD2, whose mutation causes spastic paraplegia, promotes reactive oxygen species generation and apoptosis. 30038238 2018
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.200 Biomarker disease BEFREE Eventually, we further validated the cellular changes in fibroblasts of two major spastic paraplegia (SPG) patients (SPG4 and SPG11) in vitro. 29980238 2018
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.180 Biomarker disease BEFREE Eventually, we further validated the cellular changes in fibroblasts of two major spastic paraplegia (SPG) patients (SPG4 and SPG11) in vitro. 29980238 2018
Entrez Id: 3798
Gene Symbol: KIF5A
KIF5A
0.190 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 65055
Gene Symbol: REEP1
REEP1
0.130 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 23209
Gene Symbol: MLC1
MLC1
0.010 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 7345
Gene Symbol: UCHL1
UCHL1
0.110 GeneticVariation disease BEFREE Spastic Paraplegia-79 (SPG79) is an autosomal recessive type of childhood onset complicated by hereditary spastic paraplegia. 29735986 2018
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 Biomarker disease BEFREE EGFR kinase or ERK1/2 inhibitors impaired Spastic paraplegia 20 knockout-induced cancer cell growth. 29673586 2018
Entrez Id: 57704
Gene Symbol: GBA2
GBA2
0.120 GeneticVariation disease BEFREE Novel homozygous GBA2 mutation in a patient with complicated spastic paraplegia. 29524657 2018
Entrez Id: 5354
Gene Symbol: PLP1
PLP1
0.140 Biomarker disease BEFREE Two other less severe phenotypes were subsequently described, including the spastic paraplegia syndrome and PLP1-null disease. 29478609 2018